Scalable Brain Atlas - Neuromorphometrics Inc. manually segmented brain

Human - Neuromorphometrics Inc. manually segmented brain

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This labeled brain scan was created by Neuromorphometrics, Inc., following the methods described in Caviness Jr. et al. 1999.

The original T1 MRI scan is ‘OAS1_0340_MR1’ from the 'Cross-sectional’ set in the Open Access Series of Imaging Studies (OASIS).

Two labeling protocols were used:

General Segmentation from the Harvard/Massachusetts General Hospital Center for Morphometric Analysis,
BrainCOLOR Cortical Parcellation.

If you use this atlas in a publication, cite Neuromorphometrics, Inc. as the source of the labeled brain.

This template is subject to license terms.
In addition, you must abide by our citation policy, designed to give proper credit to atlas makers.
In brief, always (1) cite each data source that contributed to your analysis, and (2) cite the Scalable Brain Atlas main publication and plugin references where appropriate.

The defining citations for this atlas template are:

T1: T1 MRI, scan 'OAS1_0340_MR1' from the OASIS 'Cross-sectional' set.
- ../../templates/NMM1103/source/1103_3.nii.gz; filesize 7083 kB; shape [256x332x256]
labels: Labels according to the General and BrainCOLOR segmentation protocols.
The label index mapper converts label indices to acronyms, full names, and rgb-values.
- ../../templates/NMM1103/source/1103_3_glm.nii.gz; filesize 432 kB; shape [256x332x256]
coronal_svg: Coronal sections of the label volume "1103_3_glm.nii", converted to Scalable Vector Graphics.
Brain regions are color-coded by the RGB to Acronym map, which can be chained with the Acronym to Fullname map.
- ../../templates/NMM1103/source/coronal_svg.zip; filesize 966 kB
wholebrain_mesh: surface mesh of the entire brain
- ../../templates/NMM1103/wholebrain.x3d; filesize 3104 kB